Summary of Study ST000191

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000162. The data can be accessed directly via it's Project DOI: 10.21228/M89012 This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

Perform statistical analysis  |  Show all samples  |  Show named metabolites  |  Download named metabolite data  
Download mwTab file (text)   |  Download mwTab file(JSON)   |  Download data files (Contains raw data)
Study IDST000191
Study TitleSCFA in Hypertension
Study SummarySamples 4-34 are sera and feces from an experiment to determine the effects of Minocycline on SCFA in Ang II-induced hypertension. Samples 35-59 are plasma samples fron an experiment to determine the effects of ACE2 activator, DIZE on SCFA in MCT-induced pulmonary hypertension. Plasma samples were collected using heparin
Institute
University of Michigan
DepartmentBiomedical Research Core Facilities
LaboratoryMetabolomics core
Last NameKachman
First NameMaureen
Address6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714
Email mkachman@umich.edu
Submit Date2015-06-08
Num Groups7
Total Subjects56
Raw Data AvailableYes
Raw Data File Type(s)d
Uploaded File Size32 M
Analysis Type DetailGC-MS
Release Date2016-06-18
Release Version1
Maureen Kachman Maureen Kachman
https://dx.doi.org/10.21228/M89012
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:

Project:

Project ID:PR000162
Project DOI:doi: 10.21228/M89012
Project Title:Neurogenic Hypertension
Project Summary:Role of neuroinflammation and microbiome in drug-resistant hypertension
Institute:University of Florida
Department:Physiology and Functional Genomics
Laboratory:Raizada Lab
Last Name:Raizada
First Name:Mohan
Address:Gainesville, FL
Email:mraizada@ufl.edu
Phone:352-392-9299

Subject:

Subject ID:SU000210
Subject Type:Animal
Subject Species:Rattus norvegicus
Taxonomy ID:10116
Species Group:Mammal

Factors:

Subject type: Animal; Subject species: Rattus norvegicus (Factor headings shown in green)

mb_sample_id local_sample_id Ang II Mino MCT DIZE
SA009661S00015928N N N N
SA009662S00015896N N N N
SA009663S00015914N N N N
SA009664S00015913N N N N
SA009665S00015929N N N N
SA009666S00015930N N N N
SA009667S00015933N N N N
SA009668S00015932N N N N
SA009669S00015931N N N N
SA009670S00015912N N N N
SA009671S00015915N N N N
SA009672S00015899N N N N
SA009673S00015898N N N N
SA009674S00015897N N N N
SA009675S00015947N N N Y
SA009676S00015948N N N Y
SA009677S00015951N N N Y
SA009678S00015946N N N Y
SA009679S00015949N N N Y
SA009680S00015950N N N Y
SA009681S00015934N N Y N
SA009682S00015935N N Y N
SA009683S00015937N N Y N
SA009684S00015936N N Y N
SA009685S00015939N N Y N
SA009686S00015938N N Y N
SA009687S00015941N N Y Y
SA009688S00015943N N Y Y
SA009689S00015942N N Y Y
SA009690S00015945N N Y Y
SA009691S00015944N N Y Y
SA009692S00015940N N Y Y
SA009693S00015909N Y N N
SA009694S00015910N Y N N
SA009695S00015908N Y N N
SA009696S00015924N Y N N
SA009697S00015911N Y N N
SA009698S00015925N Y N N
SA009699S00015926N Y N N
SA009700S00015927N Y N N
SA009701S00015919Y N N N
SA009702S00015901Y N N N
SA009703S00015900Y N N N
SA009704S00015902Y N N N
SA009705S00015903Y N N N
SA009706S00015917Y N N N
SA009707S00015916Y N N N
SA009708S00015918Y N N N
SA009709S00015923Y Y N N
SA009710S00015905Y Y N N
SA009711S00015904Y Y N N
SA009712S00015906Y Y N N
SA009713S00015907Y Y N N
SA009714S00015921Y Y N N
SA009715S00015920Y Y N N
SA009716S00015922Y Y N N
Showing results 1 to 56 of 56

Collection:

Collection ID:CO000198
Collection Summary:-
Sample Type:Serum

Treatment:

Treatment ID:TR000218

Sample Preparation:

Sampleprep ID:SP000212
Sampleprep Summary:-
Sampleprep Protocol Filename:SCFA_analysis_protocol-2015-03-10.docx

Combined analysis:

Analysis ID AN000292 AN000293
Analysis type MS MS
Chromatography type GC GC
Chromatography system
Column Phenomenex Zebron ZB-WAXplus (30m x 0.25mm,0.25um) Phenomenex Zebron ZB-WAXplus (30m x 0.25mm,0.25um)
MS Type EI EI
MS instrument type Single quadrupole Single quadrupole
MS instrument name Agilent 5975C Agilent 5975C
Ion Mode POSITIVE POSITIVE
Units µM pmol/mg sample

Chromatography:

Chromatography ID:CH000214
Methods ID:AQM030
Methods Filename:WAXPLUS_100-200C_2_SIM.txt
Column Name:Phenomenex Zebron ZB-WAXplus (30m x 0.25mm,0.25um)
Chromatography Type:GC

MS:

MS ID:MS000241
Analysis ID:AN000292
Instrument Name:Agilent 5975C
Instrument Type:Single quadrupole
MS Type:EI
Ion Mode:POSITIVE
Acquisition Parameters File:WAXPLUS_100-200C_2_SIM.txt
Processing Parameters File:EX00350-SCFA-Quant-methods-feces.m.zip
  
MS ID:MS000242
Analysis ID:AN000293
Instrument Name:Agilent 5975C
Instrument Type:Single quadrupole
MS Type:EI
Ion Mode:POSITIVE
Acquisition Parameters File:WAXPLUS_100-200C_2_SIM.txt
Processing Parameters File:EX00350-SCFA-Quant-methods-plasma.m.zip
  logo