Metabolomics Structure Database

 
MW REGNO: 73592
Common Name:2',3'-cyclic UMP
Systematic Name:alpha-D-ribofuranosyl uridine-2',3'-cyclic phosphate
RefMet Name:2',3' cyclic UMP
Synonyms:uridine 2',3'-cyclic monophosphate [PubChem Synonyms]
Exact Mass:
306.0253 (neutral)    Calculate m/z:
Formula:C9H11N2O8P
InChIKey:HWDMHJDYMFRXOX-XVFCMESISA-N
ClassyFire superclass:Nucleosides, nucleotides, and analogues [C0000289]
ClassyFire class:Pyrimidine nucleotides [C0001509]
ClassyFire subclass:Cyclic pyrimidine nucleotides [C0001492]
ClassyFire direct parent:2',3'-cyclic pyrimidine nucleotides [C0001495]
SMILES:c1cn([C@H]2[C@H]3[C@@H]([C@@H](CO)O2)OP(=O)(O)O3)c(=O)[nH]c1=O
Studies:Available studies (via RefMet name)

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Calculated physicochemical properties (?):

Heavy Atoms: 20  
Rings: 3  
Aromatic Rings: 1  
Rotatable Bonds: 2  
van der Waals Molecular volume: 220.51 Å3 molecule-1  
Toplogical Polar Sufrace Area: 146.29 Å2 molecule-1  
Hydrogen Bond Donors: 3  
Hydrogen Bond Acceptors: 9  
logP: 1.27  
Molar Refractivity: 63.93  
Fraction sp3 Carbons: 0.56  
sp3 Carbons: 5  

References

LIPID MAPS classification: "Update of the LIPID MAPS comprehensive classification system for lipids", Fahy E, Subramaniam S, Murphy RC, Nishijima M, Raetz CR, Shimizu T, Spener F, van Meer G, Wakelam MJ, and Dennis EA, J. Lipid Res. (2009) 50: S9-S14. DOI: 10.1194/jlr.R800095-JLR200
ClassyFire classification: "ClassyFire: automated chemical classification with a comprehensive, computable taxonomy", Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS, J. Cheminformatics (2016) 8:61. DOI: 10.1186/s13321-016-0174-y

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