Summary of Study ST000236
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000189. The data can be accessed directly via it's Project DOI: 10.21228/M8TS3D This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
Study ID | ST000236 |
Study Title | Quick Comparison of Urine Metabolites in Human and SD Rats of Different Sex by Untargeted UPLC-TOFMS and In-house Software Platform |
Study Type | Biomarker Discovery |
Study Summary | Human urine samples were collected before breakfast from 14 male and 13 female Chinese post-graduate students, age from 23 to 29, on the morning of sample collection day. Male (n=8) and female (n=8) SD rats weighing between 220 and 250g were used. On the morning of sample collection day, each rat was deprived of food and put in metabolic cage for 24h urine collection. All urine samples were frozen at -80°C prior to analysis. |
Institute | Beijing Institute of Radiation Medicine |
Department | Department of Pharmacology and Toxicology |
Last Name | Liang |
First Name | Qiande |
Address | 27 Taiping Road, Beijing, P.R.China |
liangqiande@yeah.net | |
Submit Date | 2015-08-09 |
Num Groups | 4 |
Total Subjects | 43 |
Raw Data File Type(s) | raw(Waters) |
Analysis Type Detail | LC-MS |
Release Date | 2015-09-09 |
Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Combined analysis:
Analysis ID | AN000357 | AN000358 | AN000359 | AN000360 | AN000361 | AN000362 |
---|---|---|---|---|---|---|
Analysis type | MS | MS | MS | MS | MS | MS |
Chromatography type | Reversed phase | Reversed phase | Reversed phase | Reversed phase | Reversed phase | Reversed phase |
Chromatography system | Waters Acquity | Waters Acquity | Waters Acquity | Waters Acquity | Waters Acquity | Waters Acquity |
Column | Waters Acquity HSS T3 (100 x 2.1mm,1.8um) | Waters Acquity HSS T3 (100 x 2.1mm,1.8um) | Waters Acquity HSS T3 (100 x 2.1mm,1.8um) | Waters Acquity HSS T3 (100 x 2.1mm,1.8um) | Waters Acquity HSS T3 (100 x 2.1mm,1.8um) | Waters Acquity HSS T3 (100 x 2.1mm,1.8um) |
MS Type | ESI | ESI | ESI | ESI | ESI | ESI |
MS instrument type | QTOF | QTOF | QTOF | QTOF | QTOF | QTOF |
MS instrument name | Waters Synapt-HDMS | Waters Synapt-HDMS | Waters Synapt-HDMS | Waters Synapt-HDMS | Waters Synapt-HDMS | Waters Synapt-HDMS |
Ion Mode | POSITIVE | POSITIVE | POSITIVE | NEGATIVE | NEGATIVE | NEGATIVE |
Units | Peak Height | Peak Height | Peak Height | Peak Height | Peak Height | Peak Height |
MS:
MS ID: | MS000303 |
Analysis ID: | AN000357 |
Instrument Name: | Waters Synapt-HDMS |
Instrument Type: | QTOF |
MS Type: | ESI |
Ion Mode: | POSITIVE |
Capillary Voltage: | 3kV |
Collision Energy: | 6V (trap)/4V (transfer) |
Collision Gas: | Ar |
Dry Gas Flow: | 900 L/h |
Dry Gas Temp: | 450C |
Ion Source Temperature: | 100C |
Ionization: | ESI |
Source Temperature: | 100C |
Desolvation Gas Flow: | 900 L/h |
Desolvation Temperature: | 450C |
Acquisition Parameters File: | Inlet_Method_File_Name:_20100505 _Positive_Ion_Mode_MS_Method_File_Name:_20120221_pos_50-1500 |
Processing Parameters File: | TR_0-18_50-1500_005_020_YES6_YES.mlm |
MS ID: | MS000304 |
Analysis ID: | AN000358 |
Instrument Name: | Waters Synapt-HDMS |
Instrument Type: | QTOF |
MS Type: | ESI |
Ion Mode: | POSITIVE |
Capillary Voltage: | 3kV |
Collision Energy: | 6V (trap)/4V (transfer) |
Collision Gas: | Ar |
Dry Gas Flow: | 900 L/h |
Dry Gas Temp: | 450? |
Ion Source Temperature: | 100? |
Ionization: | ESI |
Source Temperature: | 100? |
Desolvation Gas Flow: | 900 L/h |
Desolvation Temperature: | 450? |
Acquisition Parameters File: | Inlet_Method_File_Name:_20100505 _Positive_Ion_Mode_MS_Method_File_Name:_20120221_pos_50-1500 |
Processing Parameters File: | TR_0-18_50-1500_005_020_YES6_YES.mlm |
MS ID: | MS000305 |
Analysis ID: | AN000359 |
Instrument Name: | Waters Synapt-HDMS |
Instrument Type: | QTOF |
MS Type: | ESI |
Ion Mode: | POSITIVE |
Capillary Voltage: | 3kV |
Collision Energy: | 6V (trap)/4V (transfer) |
Collision Gas: | Ar |
Dry Gas Flow: | 900 L/h |
Dry Gas Temp: | 450C |
Ion Source Temperature: | 100C |
Ionization: | ESI |
Source Temperature: | 100C |
Desolvation Gas Flow: | 900 L/h |
Desolvation Temperature: | 450C |
Acquisition Parameters File: | Inlet_Method_File_Name:_20100505 _Positive_Ion_Mode_MS_Method_File_Name:_20120221_pos_50-1500 |
Processing Parameters File: | TR_0-18_50-1500_005_020_YES6_YES.mlm |
MS ID: | MS000306 |
Analysis ID: | AN000360 |
Instrument Name: | Waters Synapt-HDMS |
Instrument Type: | QTOF |
MS Type: | ESI |
Ion Mode: | NEGATIVE |
Capillary Voltage: | 2.9kV |
Collision Energy: | 6V (trap)/4V (transfer) |
Collision Gas: | Ar |
Dry Gas Flow: | 900 L/h |
Dry Gas Temp: | 450C |
Ion Source Temperature: | 100C |
Ionization: | ESI |
Source Temperature: | 100C |
Desolvation Gas Flow: | 900 L/h |
Desolvation Temperature: | 450C |
Acquisition Parameters File: | Inlet_Method_File_Name:_20100505 _Negative_Ion_Mode_MS_Mehod_File_Name:_20120221_neg_50-1500 |
Processing Parameters File: | TR_0-18_50-1500_005_020_YES6_YES.mlm |
MS ID: | MS000307 |
Analysis ID: | AN000361 |
Instrument Name: | Waters Synapt-HDMS |
Instrument Type: | QTOF |
MS Type: | ESI |
Ion Mode: | NEGATIVE |
Capillary Voltage: | 2.9kV |
Collision Energy: | 6V (trap)/4V (transfer) |
Collision Gas: | Ar |
Dry Gas Flow: | 900 L/h |
Dry Gas Temp: | 450C |
Ion Source Temperature: | 100C |
Ionization: | ESI |
Source Temperature: | 100C |
Desolvation Gas Flow: | 900 L/h |
Desolvation Temperature: | 450C |
Acquisition Parameters File: | Inlet_Method_File_Name:_20100505 _Negative_Ion_Mode_MS_Mehod_File_Name:_20120221_neg_50-1500 |
Processing Parameters File: | TR_0-18_50-1500_005_020_YES6_YES.mlm |
MS ID: | MS000308 |
Analysis ID: | AN000362 |
Instrument Name: | Waters Synapt-HDMS |
Instrument Type: | QTOF |
MS Type: | ESI |
Ion Mode: | NEGATIVE |
Capillary Voltage: | 2.9kV |
Collision Energy: | 6V (trap)/4V (transfer) |
Collision Gas: | Ar |
Dry Gas Flow: | 900 L/h |
Dry Gas Temp: | 450C |
Ion Source Temperature: | 100C |
Ionization: | ESI |
Source Temperature: | 100C |
Desolvation Gas Flow: | 900 L/h |
Desolvation Temperature: | 450C |
Acquisition Parameters File: | Inlet_Method_File_Name:_20100505 _Negative_Ion_Mode_MS_Mehod_File_Name:_20120221_neg_50-1500 |
Processing Parameters File: | TR_0-18_50-1500_005_020_YES6_YES.mlm |