Summary of Study ST000236

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000189. The data can be accessed directly via it's Project DOI: 10.21228/M8TS3D This work is supported by NIH grant, U2C- DK119886.

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Study IDST000236
Study TitleQuick Comparison of Urine Metabolites in Human and SD Rats of Different Sex by Untargeted UPLC-TOFMS and In-house Software Platform
Study TypeBiomarker Discovery
Study SummaryHuman urine samples were collected before breakfast from 14 male and 13 female Chinese post-graduate students, age from 23 to 29, on the morning of sample collection day. Male (n=8) and female (n=8) SD rats weighing between 220 and 250g were used. On the morning of sample collection day, each rat was deprived of food and put in metabolic cage for 24h urine collection. All urine samples were frozen at -80°C prior to analysis.
Institute
Beijing Institute of Radiation Medicine
DepartmentDepartment of Pharmacology and Toxicology
Last NameLiang
First NameQiande
Address27 Taiping Road, Beijing, P.R.China
Emailliangqiande@yeah.net
Submit Date2015-08-09
Num Groups4
Total Subjects43
Raw Data File Type(s)raw(Waters)
Analysis Type DetailLC-MS
Release Date2015-09-09
Release Version1
Qiande Liang Qiande Liang
https://dx.doi.org/10.21228/M8TS3D
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

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Combined analysis:

Analysis ID AN000357 AN000358 AN000359 AN000360 AN000361 AN000362
Analysis type MS MS MS MS MS MS
Chromatography type Reversed phase Reversed phase Reversed phase Reversed phase Reversed phase Reversed phase
Chromatography system Waters Acquity Waters Acquity Waters Acquity Waters Acquity Waters Acquity Waters Acquity
Column Waters Acquity HSS T3 (100 x 2.1mm, 1.8um) Waters Acquity HSS T3 (100 x 2.1mm, 1.8um) Waters Acquity HSS T3 (100 x 2.1mm, 1.8um) Waters Acquity HSS T3 (100 x 2.1mm, 1.8um) Waters Acquity HSS T3 (100 x 2.1mm, 1.8um) Waters Acquity HSS T3 (100 x 2.1mm, 1.8um)
MS Type ESI ESI ESI ESI ESI ESI
MS instrument type QTOF QTOF QTOF QTOF QTOF QTOF
MS instrument name Waters Synapt-HDMS Waters Synapt-HDMS Waters Synapt-HDMS Waters Synapt-HDMS Waters Synapt-HDMS Waters Synapt-HDMS
Ion Mode POSITIVE POSITIVE POSITIVE NEGATIVE NEGATIVE NEGATIVE
Units Peak Height Peak Height Peak Height Peak Height Peak Height Peak Height

MS:

MS ID:MS000303
Analysis ID:AN000357
Instrument Name:Waters Synapt-HDMS
Instrument Type:QTOF
MS Type:ESI
Ion Mode:POSITIVE
Capillary Voltage:3kV
Collision Energy:6V (trap)/4V (transfer)
Collision Gas:Ar
Dry Gas Flow:900 L/h
Dry Gas Temp:450C
Ion Source Temperature:100C
Ionization:ESI
Source Temperature:100C
Desolvation Gas Flow:900 L/h
Desolvation Temperature:450C
Acquisition Parameters File:Inlet_Method_File_Name:_20100505
_Positive_Ion_Mode_MS_Method_File_Name:_20120221_pos_50-1500
Processing Parameters File:TR_0-18_50-1500_005_020_YES6_YES.mlm
  
MS ID:MS000304
Analysis ID:AN000358
Instrument Name:Waters Synapt-HDMS
Instrument Type:QTOF
MS Type:ESI
Ion Mode:POSITIVE
Capillary Voltage:3kV
Collision Energy:6V (trap)/4V (transfer)
Collision Gas:Ar
Dry Gas Flow:900 L/h
Dry Gas Temp:450?
Ion Source Temperature:100?
Ionization:ESI
Source Temperature:100?
Desolvation Gas Flow:900 L/h
Desolvation Temperature:450?
Acquisition Parameters File:Inlet_Method_File_Name:_20100505
_Positive_Ion_Mode_MS_Method_File_Name:_20120221_pos_50-1500
Processing Parameters File:TR_0-18_50-1500_005_020_YES6_YES.mlm
  
MS ID:MS000305
Analysis ID:AN000359
Instrument Name:Waters Synapt-HDMS
Instrument Type:QTOF
MS Type:ESI
Ion Mode:POSITIVE
Capillary Voltage:3kV
Collision Energy:6V (trap)/4V (transfer)
Collision Gas:Ar
Dry Gas Flow:900 L/h
Dry Gas Temp:450C
Ion Source Temperature:100C
Ionization:ESI
Source Temperature:100C
Desolvation Gas Flow:900 L/h
Desolvation Temperature:450C
Acquisition Parameters File:Inlet_Method_File_Name:_20100505
_Positive_Ion_Mode_MS_Method_File_Name:_20120221_pos_50-1500
Processing Parameters File:TR_0-18_50-1500_005_020_YES6_YES.mlm
  
MS ID:MS000306
Analysis ID:AN000360
Instrument Name:Waters Synapt-HDMS
Instrument Type:QTOF
MS Type:ESI
Ion Mode:NEGATIVE
Capillary Voltage:2.9kV
Collision Energy:6V (trap)/4V (transfer)
Collision Gas:Ar
Dry Gas Flow:900 L/h
Dry Gas Temp:450C
Ion Source Temperature:100C
Ionization:ESI
Source Temperature:100C
Desolvation Gas Flow:900 L/h
Desolvation Temperature:450C
Acquisition Parameters File:Inlet_Method_File_Name:_20100505
_Negative_Ion_Mode_MS_Mehod_File_Name:_20120221_neg_50-1500
Processing Parameters File:TR_0-18_50-1500_005_020_YES6_YES.mlm
  
MS ID:MS000307
Analysis ID:AN000361
Instrument Name:Waters Synapt-HDMS
Instrument Type:QTOF
MS Type:ESI
Ion Mode:NEGATIVE
Capillary Voltage:2.9kV
Collision Energy:6V (trap)/4V (transfer)
Collision Gas:Ar
Dry Gas Flow:900 L/h
Dry Gas Temp:450C
Ion Source Temperature:100C
Ionization:ESI
Source Temperature:100C
Desolvation Gas Flow:900 L/h
Desolvation Temperature:450C
Acquisition Parameters File:Inlet_Method_File_Name:_20100505
_Negative_Ion_Mode_MS_Mehod_File_Name:_20120221_neg_50-1500
Processing Parameters File:TR_0-18_50-1500_005_020_YES6_YES.mlm
  
MS ID:MS000308
Analysis ID:AN000362
Instrument Name:Waters Synapt-HDMS
Instrument Type:QTOF
MS Type:ESI
Ion Mode:NEGATIVE
Capillary Voltage:2.9kV
Collision Energy:6V (trap)/4V (transfer)
Collision Gas:Ar
Dry Gas Flow:900 L/h
Dry Gas Temp:450C
Ion Source Temperature:100C
Ionization:ESI
Source Temperature:100C
Desolvation Gas Flow:900 L/h
Desolvation Temperature:450C
Acquisition Parameters File:Inlet_Method_File_Name:_20100505
_Negative_Ion_Mode_MS_Mehod_File_Name:_20120221_neg_50-1500
Processing Parameters File:TR_0-18_50-1500_005_020_YES6_YES.mlm
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