Summary of Study ST001880

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001186. The data can be accessed directly via it's Project DOI: 10.21228/M8DD61 This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.

Show all samples  |  Perform analysis on untargeted data  
Download mwTab file (text)   |  Download mwTab file(JSON)   |  Download data files (Contains raw data)
Study IDST001880
Study TitleNMR Predator Cues Target Signaling Pathways in Toxic Algal Metabolome (Polar metabolites)
Study Type1H NMR Metabolomics to elucidate signaling pathway
Study SummaryMetabolomics investigation of the phytoplankton Alexandrium minutum with and without copepod cues in order to explore cell signaling involved in toxin induction.
Institute
Georgia Institute of Technology
DepartmentSchool of Biological Sciences, School of Chemistry and Biochemistry, Center for Microbial Dynamics and Infection, Parker H. Petit Institute for Bioengineering and Bioscience
LaboratoryKubanek Lab
Last NameBrown
First NameEmily
Address950 Atlantic Dr Atlanta, Georgia USA 30332
Emailjulia.kubanek@biosci.gatech.edu
Phone404-894-8424
Submit Date2021-07-15
Num Groups2
Total Subjects40
Study CommentsPart 1 of 3. This part includes NMR analysis of polar metabolites using oPLSDA. Parts 2 and 3 inlcude NMR analysis of nonpolar metabolites and the corresponding mass spectrometry metabolomics for both polar and non-polar metabolites.
Raw Data AvailableYes
Raw Data File Type(s)fid
Analysis Type DetailNMR
Release Date2021-07-27
Release Version1
Emily Brown Emily Brown
https://dx.doi.org/10.21228/M8DD61
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:

Factors:

Subject type: Other organism; Subject species: Alexandrium minutum (Factor headings shown in green)

mb_sample_id local_sample_id Treatment
SA175050Control 16Control
SA175051Control 14Control
SA175052Control 13Control
SA175053Control 17Control
SA175054Control 19Control
SA175055Control 1Control
SA175056Control 20Control
SA175057Control 12Control
SA175058Control 18Control
SA175059Control 15Control
SA175060Control 5Control
SA175061Control 4Control
SA175062Control 11Control
SA175063Control 2Control
SA175064Control 6Control
SA175065Control 3Control
SA175066Control 7Control
SA175067Control 10Control
SA175068Control 9Control
SA175069Control 8Control
SA175070Copepodamide 15Copepodamide
SA175071Copepodamide 14Copepodamide
SA175072Copepodamide 13Copepodamide
SA175073Copepodamide 16Copepodamide
SA175074Copepodamide 19Copepodamide
SA175075Copepodamide 12Copepodamide
SA175076Copepodamide 20Copepodamide
SA175077Copepodamide 18Copepodamide
SA175078Copepodamide 17Copepodamide
SA175079Copepodamide 1Copepodamide
SA175080Copepodamide 5Copepodamide
SA175081Copepodamide 4Copepodamide
SA175082Copepodamide 3Copepodamide
SA175083Copepodamide 2Copepodamide
SA175084Copepodamide 6Copepodamide
SA175085Copepodamide 7Copepodamide
SA175086Copepodamide 10Copepodamide
SA175087Copepodamide 9Copepodamide
SA175088Copepodamide 8Copepodamide
SA175089Copepodamide 11Copepodamide
Showing results 1 to 40 of 40
  logo