Summary of Study ST001912
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001206. The data can be accessed directly via it's Project DOI: 10.21228/M8TD6R This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
| Study ID | ST001912 |
| Study Title | Identification of effector metabolites using exometabolite profiling of diverse microalgae |
| Study Summary | We conducted an untargeted metabolomic analysis of non-polar exometabolites from four phylogenetically and ecologically diverse eukaryotic microalgal strains grown in the laboratory: freshwater Chlamydomonas reinhardtii, brackish Desmodesmus sp., marine Phaeodactylum tricornutum, and marine Microchloropsis salina. We analyzed both exometabolomes and cell pellet metabolomes to identify released metabolites based on relative enrichment in the exometabolomes. |
| Institute | Lawrence Berkeley National Laboratory |
| Last Name | Brisson |
| First Name | Vanessa |
| Address | 7000 East Ave, Livermore, CA, 94550, USA |
| brisson2@llnl.gov | |
| Phone | 5107177560 |
| Submit Date | 2021-08-23 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | mzML |
| Analysis Type Detail | LC-MS |
| Release Date | 2021-09-10 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Factors:
Subject type: Algae; Subject species: Chlamydomonas reinhardtii;Desmodesmus sp.;Phaeodactylum tricornutum;Microchloropsis salina (Factor headings shown in green)
| mb_sample_id | local_sample_id | Type | Medium | Algal strain or abiotic control condition | Incubation |
|---|---|---|---|---|---|
| SA176935 | 79_E-FW-Cr-Inc_4 | E - exometabolome | FW - freshwater | Cr - Chlamydomonas reinhardtii | Inc - incubated |
| SA176936 | 78_E-FW-Cr-Inc_3 | E - exometabolome | FW - freshwater | Cr - Chlamydomonas reinhardtii | Inc - incubated |
| SA176937 | 76_E-FW-Cr-Inc_1 | E - exometabolome | FW - freshwater | Cr - Chlamydomonas reinhardtii | Inc - incubated |
| SA176938 | 80_E-FW-Cr-Inc_5 | E - exometabolome | FW - freshwater | Cr - Chlamydomonas reinhardtii | Inc - incubated |
| SA176939 | 77_E-FW-Cr-Inc_2 | E - exometabolome | FW - freshwater | Cr - Chlamydomonas reinhardtii | Inc - incubated |
| SA176940 | 86_E-FW-DF-Inc_1 | E - exometabolome | FW - freshwater | DF - Desmodesmus sp. | Inc - incubated |
| SA176941 | 90_E-FW-DF-Inc_5 | E - exometabolome | FW - freshwater | DF - Desmodesmus sp. | Inc - incubated |
| SA176942 | 88_E-FW-DF-Inc_3 | E - exometabolome | FW - freshwater | DF - Desmodesmus sp. | Inc - incubated |
| SA176943 | 89_E-FW-DF-Inc_4 | E - exometabolome | FW - freshwater | DF - Desmodesmus sp. | Inc - incubated |
| SA176944 | 87_E-FW-DF-Inc_2 | E - exometabolome | FW - freshwater | DF - Desmodesmus sp. | Inc - incubated |
| SA176945 | 67_E-FW-TxCtrl-Inc_2 | E - exometabolome | FW - freshwater | TxCtrl - treatment control | Inc - incubated |
| SA176946 | 66_E-FW-TxCtrl-Inc_1 | E - exometabolome | FW - freshwater | TxCtrl - treatment control | Inc - incubated |
| SA176947 | 68_E-FW-TxCtrl-Inc_3 | E - exometabolome | FW - freshwater | TxCtrl - treatment control | Inc - incubated |
| SA176948 | 70_E-FW-TxCtrl-Inc_5 | E - exometabolome | FW - freshwater | TxCtrl - treatment control | Inc - incubated |
| SA176949 | 69_E-FW-TxCtrl-Inc_4 | E - exometabolome | FW - freshwater | TxCtrl - treatment control | Inc - incubated |
| SA176950 | 57_E-FW-TxCtrl-noInc_2 | E - exometabolome | FW - freshwater | TxCtrl - treatment control | noInc - not incubated |
| SA176951 | 56_E-FW-TxCtrl-noInc_1 | E - exometabolome | FW - freshwater | TxCtrl - treatment control | noInc - not incubated |
| SA176952 | 58_E-FW-TxCtrl-noInc_3 | E - exometabolome | FW - freshwater | TxCtrl - treatment control | noInc - not incubated |
| SA176953 | 59_E-FW-TxCtrl-noInc_4 | E - exometabolome | FW - freshwater | TxCtrl - treatment control | noInc - not incubated |
| SA176954 | 60_E-FW-TxCtrl-noInc_5 | E - exometabolome | FW - freshwater | TxCtrl - treatment control | noInc - not incubated |
| SA176955 | 47_E-SW-DS-Inc_2 | E - exometabolome | SW - saltwater | DS - Desmodesmus sp. | Inc - incubated |
| SA176956 | 49_E-SW-DS-Inc_4 | E - exometabolome | SW - saltwater | DS - Desmodesmus sp. | Inc - incubated |
| SA176957 | 46_E-SW-DS-Inc_1 | E - exometabolome | SW - saltwater | DS - Desmodesmus sp. | Inc - incubated |
| SA176958 | 50_E-SW-DS-Inc_5 | E - exometabolome | SW - saltwater | DS - Desmodesmus sp. | Inc - incubated |
| SA176959 | 48_E-SW-DS-Inc_3 | E - exometabolome | SW - saltwater | DS - Desmodesmus sp. | Inc - incubated |
| SA176960 | 38_E-SW-Ms-Inc_3 | E - exometabolome | SW - saltwater | Ms - Microchloropsis salina | Inc - incubated |
| SA176961 | 39_E-SW-Ms-Inc_4 | E - exometabolome | SW - saltwater | Ms - Microchloropsis salina | Inc - incubated |
| SA176962 | 40_E-SW-Ms-Inc_5 | E - exometabolome | SW - saltwater | Ms - Microchloropsis salina | Inc - incubated |
| SA176963 | 36_E-SW-Ms-Inc_1 | E - exometabolome | SW - saltwater | Ms - Microchloropsis salina | Inc - incubated |
| SA176964 | 37_E-SW-Ms-Inc_2 | E - exometabolome | SW - saltwater | Ms - Microchloropsis salina | Inc - incubated |
| SA176965 | 27_E-SW-Pt-Inc_2 | E - exometabolome | SW - saltwater | Pt - Phaeodactylum trocornutum | Inc - incubated |
| SA176966 | 28_E-SW-Pt-Inc_3 | E - exometabolome | SW - saltwater | Pt - Phaeodactylum trocornutum | Inc - incubated |
| SA176967 | 26_E-SW-Pt-Inc_1 | E - exometabolome | SW - saltwater | Pt - Phaeodactylum trocornutum | Inc - incubated |
| SA176968 | 30_E-SW-Pt-Inc_5 | E - exometabolome | SW - saltwater | Pt - Phaeodactylum trocornutum | Inc - incubated |
| SA176969 | 29_E-SW-Pt-Inc_4 | E - exometabolome | SW - saltwater | Pt - Phaeodactylum trocornutum | Inc - incubated |
| SA176970 | 16_E-SW-TxCtrl-Inc_1 | E - exometabolome | SW - saltwater | TxCtrl - treatment control | Inc - incubated |
| SA176971 | 18_E-SW-TxCtrl-Inc_3 | E - exometabolome | SW - saltwater | TxCtrl - treatment control | Inc - incubated |
| SA176972 | 19_E-SW-TxCtrl-Inc_4 | E - exometabolome | SW - saltwater | TxCtrl - treatment control | Inc - incubated |
| SA176973 | 17_E-SW-TxCtrl-Inc_2 | E - exometabolome | SW - saltwater | TxCtrl - treatment control | Inc - incubated |
| SA176974 | 20_E-SW-TxCtrl-Inc_5 | E - exometabolome | SW - saltwater | TxCtrl - treatment control | Inc - incubated |
| SA176975 | 8_E-SW-TxCtrl-noInc_3 | E - exometabolome | SW - saltwater | TxCtrl - treatment control | noInc - not incubated |
| SA176976 | 9_E-SW-TxCtrl-noInc_4 | E - exometabolome | SW - saltwater | TxCtrl - treatment control | noInc - not incubated |
| SA176977 | 7_E-SW-TxCtrl-noInc_2 | E - exometabolome | SW - saltwater | TxCtrl - treatment control | noInc - not incubated |
| SA176978 | 10_E-SW-TxCtrl-noInc_5 | E - exometabolome | SW - saltwater | TxCtrl - treatment control | noInc - not incubated |
| SA176979 | 6_E-SW-TxCtrl-noInc_1 | E - exometabolome | SW - saltwater | TxCtrl - treatment control | noInc - not incubated |
| SA177025 | 2_none-none-ExCtrl-noInc_2 | none | none | ExCtrl - extraxtion control | noInc - not incubated |
| SA177026 | 4_none-none-ExCtrl-noInc_4 | none | none | ExCtrl - extraxtion control | noInc - not incubated |
| SA177027 | 1_none-none-ExCtrl-noInc_1 | none | none | ExCtrl - extraxtion control | noInc - not incubated |
| SA177028 | 5_none-none-ExCtrl-noInc_5 | none | none | ExCtrl - extraxtion control | noInc - not incubated |
| SA177029 | 3_none-none-ExCtrl-noInc_3 | none | none | ExCtrl - extraxtion control | noInc - not incubated |
| SA176980 | 81_P-FW-Cr-Inc_1 | P - pellet | FW - freshwater | Cr - Chlamydomonas reinhardtii | Inc - incubated |
| SA176981 | 83_P-FW-Cr-Inc_3 | P - pellet | FW - freshwater | Cr - Chlamydomonas reinhardtii | Inc - incubated |
| SA176982 | 85_P-FW-Cr-Inc_5 | P - pellet | FW - freshwater | Cr - Chlamydomonas reinhardtii | Inc - incubated |
| SA176983 | 84_P-FW-Cr-Inc_4 | P - pellet | FW - freshwater | Cr - Chlamydomonas reinhardtii | Inc - incubated |
| SA176984 | 82_P-FW-Cr-Inc_2 | P - pellet | FW - freshwater | Cr - Chlamydomonas reinhardtii | Inc - incubated |
| SA176985 | 91_P-FW-DF-Inc_1 | P - pellet | FW - freshwater | DF - Desmodesmus sp. | Inc - incubated |
| SA176986 | 92_P-FW-DF-Inc_2 | P - pellet | FW - freshwater | DF - Desmodesmus sp. | Inc - incubated |
| SA176987 | 94_P-FW-DF-Inc_4 | P - pellet | FW - freshwater | DF - Desmodesmus sp. | Inc - incubated |
| SA176988 | 95_P-FW-DF-Inc_5 | P - pellet | FW - freshwater | DF - Desmodesmus sp. | Inc - incubated |
| SA176989 | 93_P-FW-DF-Inc_3 | P - pellet | FW - freshwater | DF - Desmodesmus sp. | Inc - incubated |
| SA176990 | 71_P-FW-TxCtrl-Inc_1 | P - pellet | FW - freshwater | TxCtrl - treatment control | Inc - incubated |
| SA176991 | 95_P-FW-TxCtrl-Inc_5 | P - pellet | FW - freshwater | TxCtrl - treatment control | Inc - incubated |
| SA176992 | 72_P-FW-TxCtrl-Inc_2 | P - pellet | FW - freshwater | TxCtrl - treatment control | Inc - incubated |
| SA176993 | 74_P-FW-TxCtrl-Inc_4 | P - pellet | FW - freshwater | TxCtrl - treatment control | Inc - incubated |
| SA176994 | 73_P-FW-TxCtrl-Inc_3 | P - pellet | FW - freshwater | TxCtrl - treatment control | Inc - incubated |
| SA176995 | 65_P-FW-TxCtrl-noInc_5 | P - pellet | FW - freshwater | TxCtrl - treatment control | noInc - not incubated |
| SA176996 | 64_P-FW-TxCtrl-noInc_4 | P - pellet | FW - freshwater | TxCtrl - treatment control | noInc - not incubated |
| SA176997 | 61_P-FW-TxCtrl-noInc_1 | P - pellet | FW - freshwater | TxCtrl - treatment control | noInc - not incubated |
| SA176998 | 62_P-FW-TxCtrl-noInc_2 | P - pellet | FW - freshwater | TxCtrl - treatment control | noInc - not incubated |
| SA176999 | 63_P-FW-TxCtrl-noInc_3 | P - pellet | FW - freshwater | TxCtrl - treatment control | noInc - not incubated |
| SA177000 | 53_P-SW-DS-Inc_3 | P - pellet | SW - saltwater | DS - Desmodesmus sp. | Inc - incubated |
| SA177001 | 52_P-SW-DS-Inc_2 | P - pellet | SW - saltwater | DS - Desmodesmus sp. | Inc - incubated |
| SA177002 | 51_P-SW-DS-Inc_1 | P - pellet | SW - saltwater | DS - Desmodesmus sp. | Inc - incubated |
| SA177003 | 55_P-SW-DS-Inc_5 | P - pellet | SW - saltwater | DS - Desmodesmus sp. | Inc - incubated |
| SA177004 | 54_P-SW-DS-Inc_4 | P - pellet | SW - saltwater | DS - Desmodesmus sp. | Inc - incubated |
| SA177005 | 43_P-SW-Ms-Inc_3 | P - pellet | SW - saltwater | Ms - Microchloropsis salina | Inc - incubated |
| SA177006 | 44_P-SW-Ms-Inc_4 | P - pellet | SW - saltwater | Ms - Microchloropsis salina | Inc - incubated |
| SA177007 | 42_P-SW-Ms-Inc_2 | P - pellet | SW - saltwater | Ms - Microchloropsis salina | Inc - incubated |
| SA177008 | 41_P-SW-Ms-Inc_1 | P - pellet | SW - saltwater | Ms - Microchloropsis salina | Inc - incubated |
| SA177009 | 45_P-SW-Ms-Inc_5 | P - pellet | SW - saltwater | Ms - Microchloropsis salina | Inc - incubated |
| SA177010 | 31_P-SW-Pt-Inc_1 | P - pellet | SW - saltwater | Pt - Phaeodactylum trocornutum | Inc - incubated |
| SA177011 | 34_P-SW-Pt-Inc_4 | P - pellet | SW - saltwater | Pt - Phaeodactylum trocornutum | Inc - incubated |
| SA177012 | 32_P-SW-Pt-Inc_2 | P - pellet | SW - saltwater | Pt - Phaeodactylum trocornutum | Inc - incubated |
| SA177013 | 33_P-SW-Pt-Inc_3 | P - pellet | SW - saltwater | Pt - Phaeodactylum trocornutum | Inc - incubated |
| SA177014 | 35_P-SW-Pt-Inc_5 | P - pellet | SW - saltwater | Pt - Phaeodactylum trocornutum | Inc - incubated |
| SA177015 | 24_P-SW-TxCtrl-Inc_4 | P - pellet | SW - saltwater | TxCtrl - treatment control | Inc - incubated |
| SA177016 | 21_P-SW-TxCtrl-Inc_1 | P - pellet | SW - saltwater | TxCtrl - treatment control | Inc - incubated |
| SA177017 | 22_P-SW-TxCtrl-Inc_2 | P - pellet | SW - saltwater | TxCtrl - treatment control | Inc - incubated |
| SA177018 | 23_P-SW-TxCtrl-Inc_3 | P - pellet | SW - saltwater | TxCtrl - treatment control | Inc - incubated |
| SA177019 | 55_P-SW-TxCtrl-Inc_5 | P - pellet | SW - saltwater | TxCtrl - treatment control | Inc - incubated |
| SA177020 | 13_P-SW-TxCtrl-noInc_3 | P - pellet | SW - saltwater | TxCtrl - treatment control | noInc - not incubated |
| SA177021 | 15_P-SW-TxCtrl-noInc_5 | P - pellet | SW - saltwater | TxCtrl - treatment control | noInc - not incubated |
| SA177022 | 12_P-SW-TxCtrl-noInc_2 | P - pellet | SW - saltwater | TxCtrl - treatment control | noInc - not incubated |
| SA177023 | 14_P-SW-TxCtrl-noInc_4 | P - pellet | SW - saltwater | TxCtrl - treatment control | noInc - not incubated |
| SA177024 | 11_P-SW-TxCtrl-noInc_1 | P - pellet | SW - saltwater | TxCtrl - treatment control | noInc - not incubated |
| Showing results 1 to 95 of 95 |
