Summary of Study ST003041
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001283. The data can be accessed directly via it's Project DOI: 10.21228/M8VX1B This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
| Study ID | ST003041 |
| Study Title | Soil pH, developmental stages and geographical origin differently influence the root metabolomic diversity and root-related microbial diversity of Echium vulgare from native habitats |
| Study Summary | This study examines the impact of different factors (geographic location, soil pH, genetic cluster, developmental stage) on the metabolome and microbiome of wild Echium vulgare, as well as the microbiome-metabolome correlation contained therein. Samples analyzed are wild Echium vulgare plant roots collected at six locations in Austria; out of the six locations, four contain plant roots from two different developmental stages. Extraction of metabolites and subsequent UHPLC-HRMS analysis were performed to obtain data for metabolomics analysis. |
| Institute | Aristotle University of Thessaloniki |
| Last Name | Rodić |
| First Name | Nebojša |
| Address | Stepe Stepanovića 5, Čonoplja, Vojvodina, Serbia |
| nebojsa.rodic@hotmail.com | |
| Phone | +381648766400 |
| Submit Date | 2024-01-05 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | raw(Thermo) |
| Analysis Type Detail | LC-MS |
| Release Date | 2024-01-16 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Factors:
Subject type: Plant; Subject species: Echium vulgare (Factor headings shown in green)
| mb_sample_id | local_sample_id | Location | Developmental Stage | Soil pH | Genetic cluster |
|---|---|---|---|---|---|
| SA330265 | EV_A1 | A | flowering | neutral | G1 |
| SA330266 | EV_A4 | A | flowering | neutral | G1 |
| SA330267 | EV_A5 | A | flowering | neutral | G1 |
| SA330268 | EV_A3 | A | flowering | neutral | G1 |
| SA330269 | EV_A2 | A | flowering | neutral | G1 |
| SA330270 | EV_AVII | A | rosette | neutral | G1 |
| SA330271 | EV_AVIII | A | rosette | neutral | G1 |
| SA330272 | EV_AVI | A | rosette | neutral | G1 |
| SA330273 | EV_AIV | A | rosette | neutral | G1 |
| SA330274 | EV_AI | A | rosette | neutral | G1 |
| SA330275 | EV_AV | A | rosette | neutral | G1 |
| SA330276 | EV_AII | A | rosette | neutral | G1 |
| SA330277 | EV_B6 | B | flowering | neutral | G1 |
| SA330278 | EV_B4 | B | flowering | neutral | G1 |
| SA330279 | EV_B5 | B | flowering | neutral | G1 |
| SA330280 | EV_B1 | B | flowering | neutral | G1 |
| SA330281 | EV_B2 | B | flowering | neutral | G1 |
| SA330282 | EV_B3 | B | flowering | neutral | G1 |
| SA330283 | EV_BVI | B | rosette | neutral | G1 |
| SA330284 | EV_BV | B | rosette | neutral | G1 |
| SA330285 | EV_BIV | B | rosette | neutral | G1 |
| SA330286 | EV_BI | B | rosette | neutral | G1 |
| SA330287 | EV_BII | B | rosette | neutral | G1 |
| SA330288 | EV_BIII | B | rosette | neutral | G1 |
| SA330289 | EV_C6 | C | flowering | neutral | G2 |
| SA330290 | EV_C5 | C | flowering | neutral | G2 |
| SA330291 | EV_C1 | C | flowering | neutral | G2 |
| SA330292 | EV_C4 | C | flowering | neutral | G2 |
| SA330293 | EV_C2 | C | flowering | neutral | G2 |
| SA330294 | EV_C3 | C | flowering | neutral | G2 |
| SA330295 | EV_CV | C | rosette | neutral | G2 |
| SA330296 | EV_CVI | C | rosette | neutral | G2 |
| SA330297 | EV_CIII | C | rosette | neutral | G2 |
| SA330298 | EV_CIV | C | rosette | neutral | G2 |
| SA330299 | EV_CI | C | rosette | neutral | G2 |
| SA330300 | EV_CII | C | rosette | neutral | G2 |
| SA330301 | EV_EVI | E | rosette | slightly alkaline | G2 |
| SA330302 | EV_EV | E | rosette | slightly alkaline | G2 |
| SA330303 | EV_EIV | E | rosette | slightly alkaline | G2 |
| SA330304 | EV_EI | E | rosette | slightly alkaline | G2 |
| SA330305 | EV_EII | E | rosette | slightly alkaline | G2 |
| SA330306 | EV_EIII | E | rosette | slightly alkaline | G2 |
| SA330307 | EV_F6 | F | flowering | slightly alkaline | G2 |
| SA330308 | EV_F5 | F | flowering | slightly alkaline | G2 |
| SA330309 | EV_F1 | F | flowering | slightly alkaline | G2 |
| SA330310 | EV_F4 | F | flowering | slightly alkaline | G2 |
| SA330311 | EV_F2 | F | flowering | slightly alkaline | G2 |
| SA330312 | EV_F3 | F | flowering | slightly alkaline | G2 |
| SA330313 | EV_FVI | F | rosette | slightly alkaline | G2 |
| SA330314 | EV_FV | F | rosette | slightly alkaline | G2 |
| SA330315 | EV_FII | F | rosette | slightly alkaline | G2 |
| SA330316 | EV_FIV | F | rosette | slightly alkaline | G2 |
| SA330317 | EV_FI | F | rosette | slightly alkaline | G2 |
| SA330318 | EV_FIII | F | rosette | slightly alkaline | G2 |
| SA330319 | EV_GVI | G | rosette | moderately acidic | G2 |
| SA330320 | EV_GVII | G | rosette | moderately acidic | G2 |
| SA330321 | EV_GV | G | rosette | moderately acidic | G2 |
| SA330322 | EV_GI | G | rosette | moderately acidic | G2 |
| SA330323 | EV_GIV | G | rosette | moderately acidic | G2 |
| SA330324 | EV_GII | G | rosette | moderately acidic | G2 |
| SA330325 | EV_GIII | G | rosette | moderately acidic | G2 |
| SA330326 | QC_EV | NA | NA | NA | NA |
| SA330327 | QC_EV_02 | NA | NA | NA | NA |
| SA330328 | QC_EV_03 | NA | NA | NA | NA |
| Showing results 1 to 64 of 64 |
