Summary of Study ST000612

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000448. The data can be accessed directly via it's Project DOI: 10.21228/M84W37 This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

Perform statistical analysis  |  Show all samples  |  Show named metabolites  |  Download named metabolite data  
Download mwTab file (text)   |  Download mwTab file(JSON)   |  Download data files (Contains raw data)
Study IDST000612
Study TitleSphingolipid Analysis of Human Aqueous Humor in Glaucomatous and Control eyes (part I)
Study SummaryThis study examined the profiles of sphin¬golipids and ceramides present in the aqueous humor (AH) of human control and POAG donors. Furthermore, we quantitatively compared distinct differences between glaucomatous and age-matched control eyes, identifying potential molecules for further experimentation to determine their biological role in modulating cell behavior. Lipids were identified and ratiometrically quantified in a two-step process using precursor ion scan (PIS) or neutral loss scan (NLS) with appropriate class-specific lipid standards on a TSQ Quantum Access Max mass spectrometer following established procedures. We identified several species of sphingomyelin, sphingoid base, sphingoid base-1-phosphate, and ceramides that were common between control and glaucomatous AQH. Some unique lipid species in these classes were also identified in controls but not in glaucoma and vice versa.
Institute
University of Miami
Last NameBhattacharya
First NameSanjoy
Address1638 NW 10th Avenue, Miami, Florida, 33136, USA
Emailsbhattacharya@med.miami.edu
Phone3054824103
Submit Date2017-05-26
Raw Data AvailableYes
Raw Data File Type(s)raw(Thermo)
Analysis Type DetailMS(Dir. Inf.)
Release Date2019-07-17
Release Version1
Sanjoy Bhattacharya Sanjoy Bhattacharya
https://dx.doi.org/10.21228/M84W37
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:


Factors:

Subject type: Human; Subject species: Homo sapiens (Factor headings shown in green)

mb_sample_id local_sample_id Condition
SA033857NAH16BL3Control
SA033858NAH14BL3Control
SA033859NAH13BL3Control
SA033860NAH17BL2Control
SA033861NAH19BL3Control
SA033862NAH1BL3Control
SA033863NAH20BL3Control
SA033864NAH12BL3Control
SA033865NAH18BL2Control
SA033866NAH15BL3Control
SA033867NAH5BL3Control
SA033868NAH4BL3Control
SA033869NAH11BL4Control
SA033870NAH2BL3Control
SA033871NAH6BL3Control
SA033872NAH3BL3Control
SA033873NAH7BL4Control
SA033874NAH10BL3Control
SA033875NAH9BL3Control
SA033876NAH8BL3Control
SA033877GAH15BL3Glaucomatous
SA033878GAH14BL3Glaucomatous
SA033879GAH13BL3Glaucomatous
SA033880GAH16BL3Glaucomatous
SA033881GAH19BL3Glaucomatous
SA033882GAH12BL3Glaucomatous
SA033883GAH20BL3Glaucomatous
SA033884GAH18BL3Glaucomatous
SA033885GAH17BL4Glaucomatous
SA033886GAH1BL3Glaucomatous
SA033887GAH5BL3Glaucomatous
SA033888GAH4BL3Glaucomatous
SA033889GAH3BL3Glaucomatous
SA033890GAH2BL3Glaucomatous
SA033891GAH6BL3Glaucomatous
SA033892GAH7BL4Glaucomatous
SA033893GAH10BL3Glaucomatous
SA033894GAH9BL3Glaucomatous
SA033895GAH8BL3Glaucomatous
SA033896GAH11BL3Glaucomatous
Showing results 1 to 40 of 40
  logo