Summary of Study ST001904
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001199. The data can be accessed directly via it's Project DOI: 10.21228/M8QQ5J This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
Study ID | ST001904 |
Study Title | Lipidomics analysis of outer membrane vesicles and elucidation of the ceramide phosphoinositol biosynthetic pathway in Bacteroides thetaiotaomicron |
Study Type | Lipidic profile in wild-type and mutant strains |
Study Summary | In this work, we characterized the lipid composition of membranes and OMV from Bacteroides thetaiotaomicron VPI-5482. LC-MS analysis indicate that OMV carry sphingolipids, glycerophospholipids and serine-dipeptide lipids. Sphingolipid species represent more than 50% of the total lipid content of OMV. The most abundant sphingolipids in OMV are ceramide phosphoethanolamine (CerPE) and ceramide phosphoinositol (CerPI). Bioinformatic analysis allowed the identification of the BT1522-1526 operon putatively involved in CerPI synthesis. Mutagenesis studies revealed BT1522-1526 are essential for synthesis of PI and CerPI, confirming the role of this operon in biosynthesis of CerPI. BT1522-1526 mutant strains lacking CerPI produced OMV that were indistinguishable from the wild-type strain, indicating that CerPI sphingolipid species are not involved in OMV biogenesis. Bacteroides sphingolipids are thought to modulate host-commensal interactions, and based on our data, we propose that OMV could act as long distance delivery vehicles for these molecules. |
Institute | Washington University in St. Louis |
Department | Molecular Microbiology |
Laboratory | Feldman lab |
Last Name | Sartorio |
First Name | Mariana |
Address | 660 S Euclid avenue, campus box 8230, 63110 |
mgsartorio@wustl.edu | |
Phone | 3147474477 |
Submit Date | 2021-06-22 |
Analysis Type Detail | LC-MS |
Release Date | 2021-08-30 |
Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Factors:
Subject type: Bacteria; Subject species: Bacteroides thetaiotaomicron (Factor headings shown in green)
mb_sample_id | local_sample_id | Genotype |
---|---|---|
SA176592 | TM-1522-1 | deltaBT1522 |
SA176593 | OMV-1522-2 | deltaBT1522 |
SA176594 | OMV-1522-1 | deltaBT1522 |
SA176595 | TM-1522-2 | deltaBT1522 |
SA176596 | TM-1523-1 | deltaBT1523 |
SA176597 | OMV-1523-1 | deltaBT1523 |
SA176598 | TM-1523-2 | deltaBT1523 |
SA176599 | OMV-1523-2 | deltaBT1523 |
SA176600 | OMV-1524-1 | deltaBT1524 |
SA176601 | OMV-1524-2 | deltaBT1524 |
SA176602 | TM-1524-2 | deltaBT1524 |
SA176603 | TM-1524-1 | deltaBT1524 |
SA176604 | OMV-1526-1 | deltaBT1526 |
SA176605 | OMV-1526-2 | deltaBT1526 |
SA176606 | TM-1526-2 | deltaBT1526 |
SA176607 | TM-1526-1 | deltaBT1526 |
SA176608 | TM-WT-1 | wt |
SA176609 | OMV-WT-2 | wt |
SA176610 | OMV-WT-1 | wt |
SA176611 | TM-WT-2 | wt |
Showing results 1 to 20 of 20 |