Summary of Study ST002092
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001328. The data can be accessed directly via it's Project DOI: 10.21228/M82978 This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
| Study ID | ST002092 |
| Study Title | Addressing batch effects in large-scale metabolomics with augmented experimental design and meta-analysis |
| Study Summary | Untargeted LC-MS study conducted using RP and HILIC chromatography on three groups of C. elegans: natural isolates, central metabolism mutants, and UDP-glucuronosyltransferase mutants. An augmented study design, rank transformation of the raw data, strict QA/QC followed by a meta-analysis was used for data analysis. |
| Institute | University of Georgia - Complex Carbohydrate Research Center |
| Laboratory | Edison Lab |
| Last Name | Garcia |
| First Name | Brianna |
| Address | 315 Riverbend Road |
| brianna.garcia@uga.edu | |
| Phone | 7065424401 |
| Submit Date | 2022-02-14 |
| Num Groups | 3 |
| Total Subjects | 119 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | mzML |
| Analysis Type Detail | LC-MS |
| Release Date | 2022-04-04 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Factors:
Subject type: Invertebrate; Subject species: Caenorhabditis elegans (Factor headings shown in green)
| mb_sample_id | local_sample_id | Strain | Sample type |
|---|---|---|---|
| SA200809 | b6_aos_120 | AUM2073 | sample |
| SA200810 | b6_aos_135 | AUM2073 | sample |
| SA200811 | b5_aos_51 | AUM2073 | sample |
| SA200812 | b6_aos_169 | AUM2073 | sample |
| SA200813 | b5_aos_91 | AUM2073 | sample |
| SA200814 | b5_aos_79 | AUM2073 | sample |
| SA200815 | b1_aos_142 | CB4856 | sample |
| SA200816 | b1_aos_145 | CB4856 | sample |
| SA200817 | b2_aos_130 | CB4856 | sample |
| SA200818 | b2_aos_170 | CB4856 | sample |
| SA200819 | b2_aos_199 | CX11314 | sample |
| SA200820 | b2_aos_103 | CX11314 | sample |
| SA200821 | b2_aos_175 | CX11314 | sample |
| SA200822 | b1_aos_76 | CX11314 | sample |
| SA200823 | b1_aos_25 | CX11314 | sample |
| SA200824 | b1_aos_127 | CX11314 | sample |
| SA200825 | b1_aos_65 | DL238 | sample |
| SA200826 | b1_aos_50 | DL238 | sample |
| SA200827 | b2_aos_174 | DL238 | sample |
| SA200828 | b1_aos_46 | DL238 | sample |
| SA200829 | b2_aos_165 | DL238 | sample |
| SA200830 | b2_aos_192 | DL238 | sample |
| SA200831 | b3_aos_86 | KJ550 | sample |
| SA200832 | b4_aos_134 | KJ550 | sample |
| SA200833 | b4_aos_109 | KJ550 | sample |
| SA200834 | b4_aos_100 | KJ550 | sample |
| SA200835 | b3_aos_28 | KJ550 | sample |
| SA200836 | b2_aos_56 | N2 | sample |
| SA200837 | b2_aos_106 | N2 | sample |
| SA200838 | b1_aos_48 | N2 | sample |
| SA200839 | b1_aos_67 | N2 | sample |
| SA200840 | b1_aos_58 | N2 | sample |
| SA200841 | b2_aos_188 | PD1074 | sample |
| SA200842 | b2_aos_200 | PD1074 | sample |
| SA200843 | b6_aos_102 | PD1074 | sample |
| SA200844 | b4_aos_92 | PD1074 | sample |
| SA200845 | b4_aos_180 | PD1074 | sample |
| SA200846 | b1_aos_54 | PD1074 | sample |
| SA200847 | b4_aos_87 | PD1074 | sample |
| SA200848 | b6_aos_107 | PD1074 | sample |
| SA200849 | b2_aos_167 | PD1074 | sample |
| SA200850 | b5_aos_43 | PD1074 | sample |
| SA200851 | b5_aos_41 | PD1074 | sample |
| SA200852 | b2_aos_124 | PD1074 | sample |
| SA200853 | b5_aos_54 | PD1074 | sample |
| SA200854 | b5_aos_78 | PD1074 | sample |
| SA200855 | b5_aos_87 | PD1074 | sample |
| SA200856 | b2_aos_107 | PD1074 | sample |
| SA200857 | b1_aos_78 | PD1074 | sample |
| SA200858 | b5_aos_181 | PD1074 | sample |
| SA200859 | b2_aos_102 | PD1074 | sample |
| SA200860 | b5_aos_196 | PD1074 | sample |
| SA200861 | b5_aos_75 | PD1074 | sample |
| SA200862 | b6_aos_140 | PD1074 | sample |
| SA200863 | b3_aos_78 | PD1074 | sample |
| SA200864 | b1_aos_43 | PD1074 | sample |
| SA200865 | b6_aos_90 | PD1074 | sample |
| SA200866 | b3_aos_90 | PD1074 | sample |
| SA200867 | b6_aos_198 | PD1074 | sample |
| SA200868 | b3_aos_54 | PD1074 | sample |
| SA200869 | b3_aos_43 | PD1074 | sample |
| SA200870 | b1_aos_129 | PD1074 | sample |
| SA200871 | b3_aos_38 | PD1074 | sample |
| SA200872 | b1_aos_149 | PD1074 | sample |
| SA200873 | b1_aos_27 | PD1074 | sample |
| SA200874 | b4_aos_140 | PD1074 | sample |
| SA200875 | b3_aos_99 | PD1074 | sample |
| SA200876 | b2_aos_53 | PD1074 | sample |
| SA200877 | b6_aos_167 | PD1074 | sample |
| SA200878 | b4_aos_124 | PD1074 | sample |
| SA200879 | b4_aos_107 | PD1074 | sample |
| SA200880 | b3_aos_27 | PD1074 | sample |
| SA200881 | b6_aos_188 | PD1074 | sample |
| SA200882 | b3_aos_185 | PD1074 | sample |
| SA200883 | b2_aos_108 | RB2011 | sample |
| SA200884 | b2_aos_173 | RB2011 | sample |
| SA200885 | b1_aos_122 | RB2011 | sample |
| SA200886 | b1_aos_32 | RB2011 | sample |
| SA200887 | b6_aos_118 | RB2055 | sample |
| SA200888 | b6_aos_186 | RB2055 | sample |
| SA200889 | b6_aos_114 | RB2055 | sample |
| SA200890 | b5_aos_83 | RB2055 | sample |
| SA200891 | b5_aos_26 | RB2055 | sample |
| SA200892 | b5_aos_45 | RB2055 | sample |
| SA200893 | b3_aos_36 | RB2347 | sample |
| SA200894 | b4_aos_116 | RB2347 | sample |
| SA200895 | b4_aos_95 | RB2347 | sample |
| SA200896 | b3_aos_74 | RB2347 | sample |
| SA200897 | b4_aos_171 | RB2347 | sample |
| SA200898 | b3_aos_37 | RB2347 | sample |
| SA200899 | b4_aos_82 | RB2347 | sample |
| SA200900 | b4_aos_111 | RB2550 | sample |
| SA200901 | b3_aos_35 | RB2550 | sample |
| SA200902 | b3_aos_40 | RB2550 | sample |
| SA200903 | b3_aos_71 | RB2550 | sample |
| SA200904 | b4_aos_81 | RB2550 | sample |
| SA200905 | b4_aos_96 | RB2550 | sample |
| SA200906 | b6_aos_88 | RB2607 | sample |
| SA200907 | b6_aos_166 | RB2607 | sample |
| SA200908 | b6_aos_133 | RB2607 | sample |
