Summary of Study ST000104

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000096. The data can be accessed directly via it's Project DOI: 10.21228/M8NK5J This work is supported by NIH grant, U2C- DK119886.

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Study ID	ST000104
Study Title	Factors for Epigenetic Silencing of Lung Cancer Genes
Study Type	Metabolomic analysis of Plasma
Study Summary	To test the hypothesis that the propensity for silencing of tumor suppressor genes in the respiratory epithelium of chronic smokers by promoter hypermethylation is influenced by sequence variations that modify the activity of genes and microRNAÕs that directly or indirectly influence de novo methylation and chromatin remodeling.
Institute	University of North Carolina
Department	Discovery Science Technology
Laboratory	Sumner Lab
Last Name	Sumner
First Name	Susan
Address	Eastern Regional Comprehensive Metabolomics Resource Core, UNC Nutrition Research Institute, 500 Laureate Way, Kannapolis, NC, 28081
Email	susan_sumner @unc.edu
Phone	704-250-5066
Submit Date	2014-09-29
Num Groups	3
Total Subjects	69
Raw Data Available	Yes
Raw Data File Type(s)	fid
Uploaded File Size	36 M
Analysis Type Detail	NMR
Release Date	2016-06-18
Release Version	1

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Factors:

Subject type: Human; Subject species: Homo sapiens (Factor headings shown in green)

mb_sample_id	local_sample_id	Gender	bmi_cat	drc_rank	methylation_rank	Pack Years
SA005677	PPALL0002	External_Pooled_Combined_QC	-	-	-	-
SA005678	PPALL0001	External_Pooled_Combined_QC	-	-	-	-
SA005679	PPALL0003	External_Pooled_Combined_QC	-	-	-	-
SA005680	PLO_00002	External_Pooled_Female_QC	-	-	-	-
SA005681	PLO_00003	External_Pooled_Female_QC	-	-	-	-
SA005682	PLO_00001	External_Pooled_Female_QC	-	-	-	-
SA005683	PHI_00001	External_Pooled_Male_QC	-	-	-	-
SA005684	PHI_00003	External_Pooled_Male_QC	-	-	-	-
SA005685	PHI_00002	External_Pooled_Male_QC	-	-	-	-
SA005686	PLO_Met31	Female	Normal	high	low	<70
SA005687	PLO_Met44	Female	Normal	high	low	<70
SA005688	PLO_Met41	Female	Normal	high	low	<70
SA005689	PLO_Met32	Female	Normal	high	low	<70
SA005690	PHI_Met14	Female	Normal	low	high	<70
SA005691	PHI_Met07	Female	Normal	low	high	<70
SA005692	PHI_Met05	Female	Normal	low	high	<70
SA005693	PHI_Met02	Female	Normal	low	high	<70
SA005694	PHI_Met08	Female	Normal	low	high	<70
SA005695	PHI_Met03	Female	Normal	low	medium	>= 70
SA005696	PHI_Met29	Female	Normal	not determined	high	<70
SA005697	PLO_Met45	Female	Normal	not determined	low	<70
SA005698	PLO_Met46	Female	Normal	not determined	low	<70
SA005699	PLO_Met37	Female	Obese	high	low	<70
SA005700	PLO_Met35	Female	Obese	high	low	<70
SA005701	PHI_Met06	Female	Obese	low	high	<70
SA005702	PHI_Met13	Female	Obese	low	high	<70
SA005703	PHI_Met11	Female	Obese	low	high	<70
SA005704	PHI_Met16	Female	Obese	not determined	high	<70
SA005705	PHI_Met15	Female	Obese	not determined	high	<70
SA005706	PHI_Met17	Female	Obese	not determined	high	<70
SA005707	PHI_Met26	Female	Obese	not determined	high	<70
SA005708	PHI_Met28	Female	Obese	not determined	high	<70
SA005710	PHI_Met27	Female	Obese	not determined	high	>=70
SA005709	PHI_Met19	Female	Obese	not determined	high	>= 70
SA005711	PLO_Met50	Female	Obese	not determined	low	<70
SA005712	PLO_Met49	Female	Obese	not determined	low	<70
SA005713	PLO_Met48	Female	Obese	not determined	low	<70
SA005714	PLO_Met34	Female	Overwt	high	low	<70
SA005715	PLO_Met33	Female	Overwt	high	low	<70
SA005716	PHI_Met04	Female	Overwt	low	high	<70
SA005717	PHI_Met01	Female	Overwt	low	high	<70
SA005718	PHI_Met18	Female	Overwt	not determined	high	<70
SA005719	PHI_Met20	Female	Overwt	not determined	high	<70
SA005720	PLO_Met59	Female	Overwt	not determined	low	<70
SA005721	PLO_Met57	Female	Overwt	not determined	low	<70
SA005722	PLO_Met55	Female	Overwt	not determined	low	<70
SA005723	PLO_Met60	Female	Overwt	not determined	low	<70
SA005724	PLO_Met47	Female	Overwt	not determined	low	<70
SA005725	PHI_Met10	Male	Normal	low	high	>= 70
SA005726	PLO_Met40	Male	Normal	low	low	<70
SA005727	PLO_Met38	Male	Normal	low	medium	<70
SA005728	PHI_Met22	Male	Normal	not determined	high	<70
SA005729	PHI_Met25	Male	Normal	not determined	high	>= 70
SA005730	PLO_Met56	Male	Normal	not determined	low	<70
SA005731	PLO_Met39	Male	Obese	high	low	<70
SA005732	PHI_Met30	Male	Obese	not determined	high	<70
SA005733	PHI_Met23	Male	Obese	not determined	high	<70
SA005734	PHI_Met24	Male	Obese	not determined	high	<70
SA005735	PHI_Met21	Male	Obese	not determined	high	<70
SA005736	PLO_Met52	Male	Obese	not determined	low	<70
SA005737	PLO_Met51	Male	Obese	not determined	low	>=70
SA005738	PLO_Met43	Male	Overwt	high	medium	<70
SA005739	PHI_Met09	Male	Overwt	low	high	<70
SA005740	PHI_Met12	Male	Overwt	low	high	<70
SA005741	PLO_Met36	Male	Overwt	low	low	<70
SA005742	PLO_Met42	Male	Overwt	low	low	>=70
SA005743	PLO_Met53	Male	Overwt	not determined	low	<70
SA005744	PLO_Met54	Male	Overwt	not determined	low	<70

Showing results 1 to 68 of 68

Showing results 1 to 68 of 68